PrimePCR™ Probe Assay: FGD4, Human

RT

Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

List Price:    $241.00
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Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qHsaCEP0052146
Assay Design:   exonic
Chromosome Location:   12:32717077-32717189question
Amplicon Length:   83
Splice Variants Targeted:   ENST00000534526 ENST00000531134 ENST00000472289 ENST00000427716 ENST00000546442 ENST00000583694 ENST00000525053 ENST00000266482

Gene Information

This gene encodes a protein that is involved in the regulation of the actin cytoskeleton and cell shape. This protein contains an actin filament-binding domain which together with its Dbl homology domain and one of its pleckstrin homology domains can form microspikes. This protein can activate MAPK8 independently of the actin filament-binding domain and it is also involved in the activation of CDC42 via the exchange of bound GDP for free GTP. The activation of CDC42 also enables this protein to play a role in mediating the cellular invasion of Cryptosporidium parvum an intracellular parasite that infects the gastrointestinal tract. Mutations in this gene can cause Charcot-Marie-Tooth disease type 4H (CMT4H) a disorder of the peripheral nervous system. [provided by RefSeq Oct 2008]

Gene Symbol:   FGD4
Gene Name:   FYVE, RhoGEF and PH domain containing 4
Aliases:   CMT4H, DKFZp313E1818, DKFZp434K1572, FLJ34370, FLJ42663, FRABP, MGC57222, ZFYVE6
RefSeq:   NC_000012.11 NG_008626.1 NT_009714.17
Ensembl:   ENSG00000139132
Entrez:   121512
Chromosome Mapping:   12p11.21

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)


Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript? Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced? Universal SYBR« Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.999200
y-intercept 35.700000
Efficiency 96

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

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