PrimePCR™ Probe Assay: FADS1, Human

RT

Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

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Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qHsaCEP0052711
Assay Design:   exonic
Chromosome Location:   11:61580047-61580728question
Amplicon Length:   78
Splice Variants Targeted:   ENST00000350997 ENST00000433932 ENST00000542506 ENST00000540767 ENST00000545245 ENST00000545405 ENST00000421879 ENST00000491310 ENST00000544696 ENST00000466716 ENST00000544309 ENST00000539419 ENST00000448607 ENST00000525659

Gene Information

The protein encoded by this gene is a member of the fatty acid desaturase (FADS) gene family. Desaturase enzymes regulate unsaturation of fatty acids through the introduction of double bonds between defined carbons of the fatty acyl chain. FADS family members are considered fusion products composed of an N-terminal cytochrome b5-like domain and a C-terminal multiple membrane-spanning desaturase portion both of which are characterized by conserved histidine motifs. This gene is clustered with family members FADS1 and FADS2 at 11q12-q13.1; this cluster is thought to have arisen evolutionarily from gene duplication based on its similar exon/intron organization. [provided by RefSeq Jul 2008]

Gene Symbol:   FADS1
Gene Name:   fatty acid desaturase 1
Aliases:   D5D, FADS6, FADSD5, FLJ38956, FLJ90273, LLCDL1, TU12
RefSeq:   NC_000011.9 NT_167190.1
Ensembl:   ENSG00000149485
Entrez:   3992
Chromosome Mapping:   11q12.2-q13.1

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)


Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript™ Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced™ Universal SYBR® Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.999400
y-intercept 35.800000
Efficiency 100

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

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