PrimePCR™ Probe Assay: CALR, Human

RT

Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

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Wet Lab Validated

Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qHsaCIP0030886
Assay Design:   Intron-spanning
Chromosome Location:   19:13051617-13054426question
Amplicon Length:   131
Splice Variants Targeted:   ENST00000316448 ENST00000539083

Gene Information

Calreticulin is a multifunctional protein that acts as a major Ca(2+)-binding (storage) protein in the lumen of the endoplasmic reticulum. It is also found in the nucleus suggesting that it may have a role in transcription regulation. Calreticulin binds to the synthetic peptide KLGFFKR which is almost identical to an amino acid sequence in the DNA-binding domain of the superfamily of nuclear receptors. Calreticulin binds to antibodies in certain sera of systemic lupus and Sjogren patients which contain anti-Ro/SSA antibodies it is highly conserved among species and it is located in the endoplasmic and sarcoplasmic reticulum where it may bind calcium. The amino terminus of calreticulin interacts with the DNA-binding domain of the glucocorticoid receptor and prevents the receptor from binding to its specific glucocorticoid response element. Calreticulin can inhibit the binding of androgen receptor to its hormone-responsive DNA element and can inhibit androgen receptor and retinoic acid receptor transcriptional activities in vivo as well as retinoic acid-induced neuronal differentiation. Thus calreticulin can act as an important modulator of the regulation of gene transcription by nuclear hormone receptors. Systemic lupus erythematosus is associated with increased autoantibody titers against calreticulin but calreticulin is not a Ro/SS-A antigen. Earlier papers referred to calreticulin as an Ro/SS-A antigen but this was later disproven. Increased autoantibody titer against human calreticulin is found in infants with complete congenital heart block of both the IgG and IgM classes. [provided by RefSeq Jul 2008]

Gene Symbol:   CALR
Gene Name:   calreticulin
Aliases:   CRT, FLJ26680, RO, SSA, cC1qR
RefSeq:   NC_000019.9 NT_011295.11
Ensembl:   ENSG00000179218
Entrez:   811
Chromosome Mapping:   19p13.3-p13.2

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